epitome.viz.plot_assay_heatmap

epitome.viz.plot_assay_heatmap(matrix, cellmap, assaymap)

Plots a matrix of available assays from available cells. This function takes in the numpy matrix and two dictionaries returned by get_assays_from_feature_file.

Parameters

• matrix (numpy.matrix) – numpy matrix of indices that index into Epitome data

• cellmap (dict) – map of cells indexing into rows of matrix

• assaymap (dict) – map of assays indexing into columns of matrix