epitome
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Installation and Configuration
Installing Epitome
Creating an Epitome Dataset
Usage and Examples
Creating an Epitome Dataset
Training an Epitome Model
Predicting peaks for ChIP-seq targets
Configuring data
API Documentation
epitome
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B
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C
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D
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E
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G
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H
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I
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J
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L
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P
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R
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__init__() (epitome.constants.Dataset method)
(epitome.conversion.RegionConversion method)
(epitome.dataset.EpitomeDataset method)
(epitome.models.EpitomeModel method)
(epitome.models.PeakModel method)
B
bed2Pyranges() (in module epitome.functions)
C
calibration_plot() (in module epitome.viz)
D
Dataset (class in epitome.constants)
download_and_unzip() (in module epitome.functions)
E
epitome (module)
epitome.constants (module)
epitome.conversion (module)
epitome.dataset (module)
epitome.functions (module)
epitome.generators (module)
epitome.models (module)
epitome.viz (module)
EpitomeDataset (class in epitome.dataset)
EpitomeModel (class in epitome.models)
G
generator_to_tf_dataset() (in module epitome.generators)
get_radius_indices() (in module epitome.functions)
H
heatmap_aggreement_from_model_weights() (in module epitome.viz)
I
indices_for_weighted_resample() (in module epitome.functions)
J
joint_plot() (in module epitome.viz)
L
load_data() (in module epitome.generators)
P
PeakModel (class in epitome.models)
plot_assay_heatmap() (in module epitome.viz)
R
RegionConversion (class in epitome.conversion)